You can make it so that the Pokémon are sensitive to player emotions but not NPC emotions. With NPCs they behave like normal Pokémon. Then we can get some authentic Team Rocket action going! (I'm totally not a part of Team Rocket! Definitely!)
if the Uzumaki are being attacked by the other villagues' biju, then they could send water types against matatabi and son Goku, electric type against isobu, saiken and giuki
in naruto player can first summon in kanto area.
in marvel player can first summon in jhoto area.
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